CRAN Package Check Results for Package effectsize

Last updated on 2021-07-31 10:52:11 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.5 8.55 365.57 374.12 OK
r-devel-linux-x86_64-debian-gcc 0.4.5 8.05 263.15 271.20 OK
r-devel-linux-x86_64-fedora-clang 0.4.5 437.06 OK
r-devel-linux-x86_64-fedora-gcc 0.4.5 423.18 OK
r-devel-windows-x86_64 0.4.5 15.00 317.00 332.00 OK
r-devel-windows-x86_64-gcc10-UCRT 0.4.5 OK
r-patched-linux-x86_64 0.4.5 OK
r-patched-solaris-x86 0.4.5 573.50 OK
r-release-linux-x86_64 0.4.5 10.51 343.22 353.73 OK
r-release-macos-arm64 0.4.5 WARN
r-release-macos-x86_64 0.4.5 OK
r-release-windows-ix86+x86_64 0.4.5 19.00 407.00 426.00 OK
r-oldrel-macos-x86_64 0.4.5 OK
r-oldrel-windows-ix86+x86_64 0.4.5 18.00 419.00 437.00 OK

Check Details

Version: 0.4.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘anovaES.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    ************
    Welcome to afex. For support visit: http://afex.singmann.science/
    - Functions for ANOVAs: aov_car(), aov_ez(), and aov_4()
    - Methods for calculating p-values with mixed(): 'KR', 'S', 'LRT', and 'PB'
    - 'afex_aov' and 'mixed' objects can be passed to emmeans() for follow-up tests
    - NEWS: library('emmeans') now needs to be called explicitly!
    - Get and set global package options with: afex_options()
    - Set orthogonal sum-to-zero contrasts globally: set_sum_contrasts()
    - For example analyses see: browseVignettes("afex")
    ************
    
    Attaching package: 'afex'
    
    The following object is masked from 'package:lme4':
    
     lmer
    
    Loading required package: lmerTest
    
    Attaching package: 'lmerTest'
    
    The following object is masked from 'package:lme4':
    
     lmer
    
    The following object is masked from 'package:stats':
    
     step
    
    --- finished re-building ‘anovaES.Rmd’
    
    --- re-building ‘bayesian_models.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    This is rstanarm version 2.21.1
    - See https://mc-stan.org/rstanarm/articles/priors for changes to default priors!
    - Default priors may change, so it's safest to specify priors, even if equivalent to the defaults.
    - For execution on a local, multicore CPU with excess RAM we recommend calling
     options(mc.cores = parallel::detectCores())
    
    Attaching package: 'rstanarm'
    
    The following object is masked from 'package:parameters':
    
     compare_models
    
    
    Attaching package: 'car'
    
    The following object is masked from 'package:rstanarm':
    
     logit
    
    --- finished re-building ‘bayesian_models.Rmd’
    
    --- re-building ‘convert.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘convert.Rmd’
    
    --- re-building ‘from_test_statistics.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    Loading required package: lme4
    Loading required package: Matrix
    ************
    Welcome to afex. For support visit: http://afex.singmann.science/
    - Functions for ANOVAs: aov_car(), aov_ez(), and aov_4()
    - Methods for calculating p-values with mixed(): 'KR', 'S', 'LRT', and 'PB'
    - 'afex_aov' and 'mixed' objects can be passed to emmeans() for follow-up tests
    - NEWS: library('emmeans') now needs to be called explicitly!
    - Get and set global package options with: afex_options()
    - Set orthogonal sum-to-zero contrasts globally: set_sum_contrasts()
    - For example analyses see: browseVignettes("afex")
    ************
    
    Attaching package: 'afex'
    
    The following object is masked from 'package:lme4':
    
     lmer
    
    
    Attaching package: 'lmerTest'
    
    The following object is masked from 'package:lme4':
    
     lmer
    
    The following object is masked from 'package:stats':
    
     step
    
    --- finished re-building ‘from_test_statistics.Rmd’
    
    --- re-building ‘interpret.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘interpret.Rmd’
    
    --- re-building ‘simple_htests.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    For one-way between subjects designs, partial eta squared is equivalent to eta squared.
    Returning eta squared.
    Warning in wilcox.test.default(A, B) :
     cannot compute exact p-value with ties
    --- finished re-building ‘simple_htests.Rmd’
    
    --- re-building ‘standardize_data.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Warning in grid.Call(C_stringMetric, as.graphicsAnnot(x$label)) :
     no font could be found for family "Arial"
    Quitting from lines 225-240 (standardize_data.Rmd)
    Error: processing vignette 'standardize_data.Rmd' failed with diagnostics:
    polygon edge not found
    --- failed re-building ‘standardize_data.Rmd’
    
    --- re-building ‘standardize_parameters.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    Loading required package: lme4
    Loading required package: Matrix
    Loading required package: lmerTest
    
    Attaching package: 'lmerTest'
    
    The following object is masked from 'package:lme4':
    
     lmer
    
    The following object is masked from 'package:stats':
    
     step
    
    boundary (singular) fit: see ?isSingular
    Warning: The following within-group terms have between-group variance:
     vs
    This can inflate standardized within-group parameters associated with
    these terms. See help("demean", package = "parameters") for modeling
    between- and within-subject effects.
    Loading required namespace: performance
    --- finished re-building ‘standardize_parameters.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘standardize_data.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-macos-arm64