MGMM: Missingness Aware Gaussian Mixture Models

Parameter estimation and classification for Gaussian Mixture Models (GMMs) in the presence of missing data. This package complements existing implementations by allowing for both missing elements in the input vectors and full (as opposed to strictly diagonal) covariance matrices. Estimating is performed using an expectation conditional maximization algorithm that accounts for missingness of both the cluster assignments and the vector components. The output includes the marginal cluster membership probabilities; the mean and covariance of each cluster; the posterior probabilities of cluster membership; and a completed version of the input data, with missing values imputed to their posterior expectations. For additional details, please see McCaw ZR, Julienne H, Aschard H. "MGMM: an R package for fitting Gaussian Mixture Models on Incomplete Data." <doi:10.1101/2019.12.20.884551>.

Version: 0.4.0
Depends: R (≥ 3.5.0)
Imports: cluster, methods, mvnfast, plyr, Rcpp (≥ 1.0.3), stats
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat (≥ 3.0.0), knitr, rmarkdown, withr
Published: 2021-07-25
Author: Zachary McCaw ORCID iD [aut, cre]
Maintainer: Zachary McCaw <zmccaw at alumni.harvard.edu>
License: GPL-3
NeedsCompilation: yes
CRAN checks: MGMM results

Downloads:

Reference manual: MGMM.pdf
Vignettes: Missingness Aware Gaussian Mixture Models
Package source: MGMM_0.4.0.tar.gz
Windows binaries: r-devel: MGMM_0.4.0.zip, r-devel-UCRT: MGMM_0.4.0.zip, r-release: MGMM_0.4.0.zip, r-oldrel: MGMM_0.4.0.zip
macOS binaries: r-release (arm64): MGMM_0.4.0.tgz, r-release (x86_64): MGMM_0.4.0.tgz, r-oldrel: MGMM_0.4.0.tgz
Old sources: MGMM archive

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